Program

Contenu, Previous meetings, 2012 (Banyuls), Program
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Abstracts Alphy 2012 (PDF)
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Program (PDF)

Instructions for posters: max width 120 cm; max height 140 cm

Monday 19 March
14:00 - 14:30 Welcome
14:30 - 15:15 Jose Castresana Phylogenetic and genomic approaches to study the speciation and population history of mammals
15:20 - 15:40 Damien de Vienne Overfitting in Phylogenetic Trees Reconstruction Methods: Why Species Trees are Usually Wrong
15:45 - 16:05 Céline Poux A timetree elucidates biogeographic patterns of Madagascar’s colonization by Vertebrates.
16:10 - 16:30 Jonathan Romiguier Genomic Evidence for Large, Long-Lived Mammalian Ancestors
16:35 - 17:05 Coffee break
17:10 - 17:30 Alain Guénoche Consensus tree: unique or multiple ?
17:35 - 17:55 Jean-Philippe Doyon Reconciliation algorithm for parasite/host phylogenies with paleogeographic information
18:00 - 18:20 Thi Hau Nguyen MowgliNNI: a gene tree/species tree reconciliation method accounting for gene tree uncertainty.
18:25 - 18:45 Salvador Capella-Gutierrez Disentangling the phylogenetic signal carried by alignment gaps and guide trees
Tuesday 20 March
9:00 - 9:45 Henrik Kaessmann The evolution of mammalian tissue transcriptomes
9:50 - 10:10 Kateryna Makova Microsatellites: When simple tandem repeats cross a mutation rate threshold, and go wild.
10:15 - 10:35 Laurent Guéguen Biased gene conversion in codon substitution models
10:40 - 11:10 Coffee break
11:15 - 11:35 Joao Lourenco The rate of molecular adaptation in a changing environment
11:40 - 12:00 Walid Gharib Determining the power and robustness of the branch-site test of positive selection under conditions of strong sequence divergence
12:05 - 12:25 Magdalena Gayà-Vidal Adaptive gene evolution in the human lineage
12:30 - 12:50 Joël Tuberosa A new algorithm for identifying positively selected protein regions using parwise alignments
12:55 - 14:25 Lunch
14:30 - 14:50 Eric Rivals CRAC: A multi-purpose program to analyse large read collections with sensitivity and specificity
14:55 - 15:15 Cedrik Magis Building Structure-Based Classification from Multiple Sequence Alignment with the T-RMSD method
15:20 - 15:40 Jia-Ming Chang A divide and conquer strategy for the phylogenetic reconstruction of large orthologous datasets
15:45 - 16:05 Anton Nekrutenko Galaxy: a comprehensive approach for supporting accessible, reproducible, and transparent computational research in the life sciences
16:10 - 16:40 Coffee break
16:40 - 18:40 Poster session
Wednesday 21 March
9:00 - 9:20 Ferdinand Marlétaz Pattern of whole genome duplication among the Cyprinidae fishes
9:25 - 9:45 Macarena Toll-Riera Age and structural properties as determinants of protein evolutionary rate
9:50 - 10:10 Michael Breen Epistasis sets the mode and tempo of molecular evolution
10:15 - 10:35 Yann Lesecque Tracking the molecular mechanisms responsible for GC-biased gene conversion in yeast
10:40 - 11:10 Coffee break
11:15 - 11:35 Nicolas Rochette Phylogenomic analysis of the diverse evolutionary origins of eukaryotic genes.
11:40 - 12:00 Guifré Torruella i Cortés Relationships within the Opisthokonta Based on Phylogenomic Analyses of Conserved Single-Copy Protein Domains.
12:05 - 12:25 Frédéric Delsuc Phylogenomics finally settles the position of turtles in the tree of amniotes
12:30 - 14:00 Lunch
14:05 - 14:25 Ferran Palero Genetic diversity of bacteria: Are we looking on the wrong side of the genome?
14:30 - 14:50 Laura Gomez-Valero Extensive recombination events and horizontal gene transfer shaped the Legionella pneumophila genomes
14:55 - 15:15 Romain Blanc-Mathieu Populations genomics of Ostreococcus tauri
15:20 End of Alphy’2012